TrueMethyl® Data Analysis
We have developed guidelines and bioinformatic tools to enable fast and simple analysis of data generated using our TrueMethyl products. More information on data analysis can be found below. In addition, our bioinformatics team are on hand to provide further guidance and support. For more information, please contact us at firstname.lastname@example.org.
CEGX has developed NGS guidelines, including the following sections:
- WBGS project design, sequencing and coverage guidelines
- CEGX TrueMethyl and TrueMethyl Whole-Genome Data Analysis: Next Generation Sequencing Data Sets
CEGX has developed a custom post-processing script, bsExpress, that interfaces with Bismark to output a set of summary documents and QC reports based on the conversion performance of the sequencing spike-in controls.
bsExpress is a program to perform quality control analysis of bisulfite (BS-Seq) and oxidised bisulfite (oxBS-Seq) sequencing libraries.
bsExpress is designed to perform quality control bisulfite (BS-Seq) and oxidised bisulfite (oxBS-Seq) libraries using ad hoc control sequences where cytosine modification are known.
Please contact us for more information.